Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91473g00001 ATGGGATGTTTTGCAATAAATAGTGGAACAATGTTAATTGAGAATGATCTGTTGAAGCAGGATTGGAGGTCAAGAACCAAGGTTGAGATATACCAATATGTTGTTCTGAAATGGAGCCTTGCACTTCTTATTGGTTTAATTACTGGATTTGTTGGATTTTTTAACAACCTTGGAGTTGAGAATATTGCTGGTTTCAAACTTTTACTCACTAACAATCTCATGCTCAAGCAAAAGTATCATGAGGCATTTGCAGCATACGTCGCTTGTAACATGATTTTAGGGGCTGCGGCTGCAGCCCTGTGTGCTTATATTGCCCCTGCAGCAGCAGGTTCCGGCATACCAGAG 345 0.4087 MGCFAINSGTMLIENDLLKQDWRSRTKVEIYQYVVLKWSLALLIGLITGFVGFFNNLGVENIAGFKLLLTNNLMLKQKYHEAFAAYVACNMILGAAAAALCAYIAPAAAGSGIPE 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91473g00001 115 Gene3D Clc chloride channel 29 115 - -
Trme91473g00001 115 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 13 115 - -
Trme91473g00001 115 SUPERFAMILY Clc chloride channel 15 115 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91473g00001 Trme-Chr91473 31 492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91473g00001 12 115 Ion Channels AT5G49890 73.077 6.18e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91473g00001 K05016 - aew:130779168 170.629