Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91459g00001 GATGGTGATAGTGATAAAGCTACTAAAACTCTTGAGCATCCAAGGGAAACTGCAAAAGACAACTGTGAGAGTAGAAAAAAGGGAAAGCAGCTAACAACTTCAACAGCCAAGGCTTCTGGGAAGAATGCCAAACAAGGGTCTCAAGCTTCTGATCTGCCTAATGAGGGATACGTACATGTCAGGGCTCGCCGTGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAGTGAGGAGAGAAAAGATCAGTGAAAGAATGAAGTTTCTTCAAGATCTTGTACCTGGATGCAACAAGGTCACTGGCAAGGCCGTGATGCTAGATGAAATCATTAATTATGTACAGTCTCTTCAACAACAAGT 359 0.4345 DGDSDKATKTLEHPRETAKDNCESRKKGKQLTTSTAKASGKNAKQGSQASDLPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91459g00001 120 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 116 IPR011598 GO:0046983
Trme91459g00001 120 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 12 120 IPR024097 GO:0006355
Trme91459g00001 120 Gene3D - 68 120 IPR036638 GO:0046983
Trme91459g00001 120 MobiDBLite consensus disorder prediction 28 52 - -
Trme91459g00001 120 MobiDBLite consensus disorder prediction 1 54 - -
Trme91459g00001 120 MobiDBLite consensus disorder prediction 1 27 - -
Trme91459g00001 120 SMART finulus 72 120 IPR011598 GO:0046983
Trme91459g00001 120 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 120 IPR036638 GO:0046983
Trme91459g00001 120 FunFam Transcription factor BPE 64 120 - -
Trme91459g00001 120 Pfam Helix-loop-helix DNA-binding domain 69 117 IPR011598 GO:0046983
Trme91459g00001 120 Coils Coil 106 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91459g00001 Trme-Chr91459 177 724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91459g00001 16 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 71.429 6.20e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Trme91459g00001 HLH 4.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91459g00001 - - tpra:123921399 218.394