Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91279g00001 TTTGACTGCCCACCTGTGTTCAAATCTATTTGTACGCTGGGAAATGAAAAGCCAACCAGCTTAGGTGCGGAGGAATCTGACTACAATTTCTGGCGCAAGCTGTGCTGTCCCAAATGCTTTGAAAATGGTGTTGGTAGAATTTCTCCTGCAATGATAGCTAATCAGGTCAAACGGCAAGCAGAGAAGTTTGTTATAATGTATTATAGAGGTTTACTAATGTGTGATGATGAAATGTGTAAGCATACAACNNNNNNNNNNANNNNNCGTTTGGTTGGTGATTCTGAGCGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAACGGGCATCTTAATAGAAAGGTTTCACTCCATGCACCTGTTGAATATGAACAGCTTTTTCATATATGTGATTTATAA 396 0.3864 FDCPPVFKSICTLGNEKPTSLGAEESDYNFWRKLCCPKCFENGVGRISPAMIANQVKRQAEKFVIMYYRGLLMCDDEMCKHTTXXXXXRLVGDSERGTVCPNYPRCNGHLNRKVSLHAPVEYEQLFHICDL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91279g00001 131 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 17 116 - -
Trme91279g00001 131 Gene3D DNA Polymerase alpha, zinc finger 1 131 IPR038256 -
Trme91279g00001 131 Pfam DNA Polymerase alpha zinc finger 22 117 IPR015088 GO:0003887|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91279g00001 Trme-Chr91279 1 658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91279g00001 1 131 Core DNA Replication Machinery Family AT5G67100 54.545 4.70e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91279g00001 K02320 - lja:Lj3g3v0930320.1 202.601