Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme911893g00001 TATGGTGCAGCTGTGCAAGCTGCTTTGTTGAGTGAAGACTTTAAAAATGTTCCAAACTTGGTTCTGCAAGATGTTGCACCTTTGTCCCTTGGTATCTCTGTTCAAGGAGATATCATGGATGCTGTTATTACTAGGAACACTAGCATTCCTATCAAGAAAACAGAACACTATAGAACTACTATTGATAACCAAGCTTCTGCTGCTTTCCAGATTTATGAGG 220 0.3955 YGAAVQAALLSEDFKNVPNLVLQDVAPLSLGISVQGDIMDAVITRNTSIPIKKTEHYRTTIDNQASAAFQIYE 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme911893g00001 73 Pfam Hsp70 protein 1 72 IPR013126 GO:0005524|GO:0140662
Trme911893g00001 73 PANTHER HEAT SHOCK PROTEIN 70KDA 1 73 IPR013126 GO:0005524|GO:0140662
Trme911893g00001 73 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 16 73 IPR029047 -
Trme911893g00001 73 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 6 73 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme911893g00001 Trme-Chr911893 11 230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme911893g00001 1 73 Calmodulin-binding Proteins AT1G56410 54.054 2.50e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme911893g00001 K26598 K03283 tpra:123896225 98.9821