Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91183g00001 ATGTTCGGTGGACTCAAACATCGTGTGTTTGAGGTTTCATTGGCTGATCTTCAAGGAGATGAGGACAATGCATTCAGGAAGATTAGGTTGAGGGCTGAAGATGTTCAGGGCAAAAATCTCCTGACCAACTTTTGGGGCATGGACTTTACCACCGACAAGCTTAGGTCATTGGTGCGAAAATGGCAAACTCTNNNNNNNNNNCATGTTGATGTTAAGACCACTGATAGTTATACTTTGAGAATGTTCTGCATTGGGTTTACCAAGAGACGCAGCAACCAGGTCAAGAGGACATGCTATGCTCAATCCAGTCAGATCAGACAG 321 0.433 MFGGLKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTLXXXHVDVKTTDSYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQ 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91183g00001 107 PANTHER 40S RIBOSOMAL PROTEIN S3A 4 107 - -
Trme91183g00001 107 SMART Ribosomal_S3Ae_2 1 106 IPR001593 GO:0003735|GO:0005840|GO:0006412
Trme91183g00001 107 Pfam Ribosomal S3Ae family 4 106 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91183g00001 Trme-Chr91183 56 684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91183g00001 4 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 88.462 2.97e-66 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91183g00001 K02984 - gmx:100805519 201.445