Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91167g00001 ATGTACTCTTTCATGAAACCTGATGAGGTGAACTCACTTGAGATGGTACTGATTGATGAGAAGGGTGACAAGATCCATGCCTCTGTTCGTCGGCAGATGCTCTATTTGTTTCGTTTGAAAATCACCGAAGGGAATGTTTACAAGATGTCTTTTTTCACCGTAGCACCCGAATCTGGTCTTTACCGCACAACTCCACACCGCTATAAACTTATTTTCGAGATGAAAACAAAAGTTCAGAGCTGTGAAAATAATACCATAGGTCGATTTGGGTTGTCTCTCACCACTATTGCAGACATTTGCGGTCATGGACCTGATTATGAATTTTTAGTTGATGTTGCTGGGTTGATTACTGGTATTTCTCCTCAGAAGGAGTATATTCGTGAGGGAAAGGTTACCAAGATGATTTTGATTGAGTTAACTGACTAG 426 0.4061 MYSFMKPDEVNSLEMVLIDEKGDKIHASVRRQMLYLFRLKITEGNVYKMSFFTVAPESGLYRTTPHRYKLIFEMKTKVQSCENNTIGRFGLSLTTIADICGHGPDYEFLVDVAGLITGISPQKEYIREGKVTKMILIELTD 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91167g00001 141 SUPERFAMILY Nucleic acid-binding proteins 6 83 IPR012340 -
Trme91167g00001 141 Gene3D - 1 81 IPR012340 -
Trme91167g00001 141 CDD RPA1_DBD_A_like 1 78 - -
Trme91167g00001 141 Pfam Domain of unknown function DUF223 14 83 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91167g00001 Trme-Chr91167 7 616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91167g00001 17 128 Core DNA Replication Machinery Family AT5G45400 27.434 1.55e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91167g00001 - - tpra:123893724 219.935