Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91149g00001 AATGTTATAGGTGAAAGAGAAATTGATAGTAGGTTGATACAGAAGAATGATGTGATCAAAGTTGTGCCGGGCGCAAAAGTAGCATCGGATGGTTTTGTTGTTTGGGGACAAAGTCATGTAAATGAGAGTATGATAACTGGTGAGGCAAAGCCTGTTGCTAAGATTAAGGGTGATATGGTAATTGGTGGTACTGTGAATGAGAATGGTGTTTTGCATGTTAAGGTGACAAGGGTTGGTTCAGAAAGTGCACTTTCTCAGATTGTTAGACTTGTTGAATCTGCTCAGATGGCTAAGGCTCCTGTTCAGAAATTTGCAGATCAGATTTCTAAATACTTTGTTCCTATAGTGAGTCTAAATTTCTAA 363 0.3857 NVIGEREIDSRLIQKNDVIKVVPGAKVASDGFVVWGQSHVNESMITGEAKPVAKIKGDMVIGGTVNENGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKFADQISKYFVPIVSLNF 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91149g00001 120 FunFam Copper-transporting ATPase 1, putative 1 95 - -
Trme91149g00001 120 SUPERFAMILY Calcium ATPase, transduction domain A 6 91 IPR008250 -
Trme91149g00001 120 Gene3D - 1 95 - -
Trme91149g00001 120 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 117 - -
Trme91149g00001 120 Pfam E1-E2 ATPase 5 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91149g00001 Trme-Chr91149 3 365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91149g00001 1 116 Primary Pumps ATPases AT1G63440 86.207 1.11e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91149g00001 K17686 - qsa:O6P43_034232 211.075