Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme911143g00001 CAGATAAAGGATGGTTTTGCTGAGGGTAAGGACCTTGTTGTGTCTGTGATGTCTGCTATGGGTGAGGAGCAAATTAATGCCCTGAAGGATGTTGGTCCAAAGAACTAG 108 0.4537 QIKDGFAEGKDLVVSVMSAMGEEQINALKDVGPKN 35
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme911143g00001 35 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 1 29 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Trme911143g00001 35 SUPERFAMILY Nucleic acid-binding proteins 1 31 IPR012340 -
Trme911143g00001 35 Gene3D - 1 33 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme911143g00001 Trme-Chr911143 1 108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme911143g00001 1 34 Eukaryotic Initiation Factors Gene Family AT1G13950 88.235 6.88e-16 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme911143g00001 K03263 - csav:115695664 71.2478