Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme911071g00001 AAGAAAAGGAGAGTTATTGTGCTGGAAGATGATGGTTTGAATGCGGAAGCTGGTGCTCTTAGCTTAAATCTTGCTGGACAGGCTTCGCCGGTGGTGGAAAGGGAGATTGCAACATGGGATGGTATGAATGGGAAAAAGGGGAGAGTAGCTGGAGGTACTCCGAATCGAGCTGTTTGTCAGGTTGAAGACTGTGGTGCAGATTTGAGTAGAGGTAAGGATTATCACAGACGT 231 0.4719 KKRRVIVLEDDGLNAEAGALSLNLAGQASPVVEREIATWDGMNGKKGRVAGGTPNRAVCQVEDCGADLSRGKDYHRR 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme911071g00001 77 Gene3D - 55 77 IPR036893 GO:0003677|GO:0005634
Trme911071g00001 77 ProSiteProfiles Zinc finger SBP-type profile. 56 77 IPR004333 GO:0003677
Trme911071g00001 77 SUPERFAMILY SBT domain 57 77 IPR036893 GO:0003677|GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme911071g00001 1 77 SBP-box Gene Family AT3G60030 45.122 2.13e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme911071g00001 - - vvo:131643968 142.895