Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91072g00001 CCAAGCTGGCGCAGGCCAAAGGGTATTGATTCCCGAGTGAGGAGAAAGTTTAAGGGAGTTACTTTGATGCCCAACATTGGTTATGGTTCAGACAAGAAGACCCGTCATTATCTGCCTAATGGATTCAAGAAGTTTCTTGTTCACAACGTCAAGGATTTGGAACTTCTCATGATGCATAACAGGACATACTGTGCTGAGATAGCACACAATGTGTCAACCAGGAAGAGAAAGGAGATTGTTGAACGTGCAGCACAATTGGATGTTGTTGTCACCAACAAGCT 281 0.4413 PSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKL 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91072g00001 94 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 2 94 IPR001515 GO:0003735|GO:0005840|GO:0006412
Trme91072g00001 94 SMART Ribosomal_L32e_2 1 92 IPR001515 GO:0003735|GO:0005840|GO:0006412
Trme91072g00001 94 CDD Ribosomal_L32_L32e 1 92 IPR001515 GO:0003735|GO:0005840|GO:0006412
Trme91072g00001 94 SUPERFAMILY Ribosomal protein L32e 2 92 IPR036351 -
Trme91072g00001 94 Pfam Ribosomal protein L32 2 92 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91072g00001 2 94 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 90.323 1.97e-62 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91072g00001 K02912 - aof:109837658 191.43