Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91065g00001 GTTGGTGACTTGGGTCTATCCAAAGTAAAATGTCAGACACTGATCTCCGGAGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAGCTACTGAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTCGGCATTGTGATGTGGGAACTCTTAACTGGCAATGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTAATCTAGAGTTGAATTCACAAGTGAAACATGTTTTGATGCCTGAAATTGTAAGGGTGGAGTAA 276 0.4348 VGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGNEPYADLHYGAIIGNLELNSQVKHVLMPEIVRVE 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91065g00001 91 PANTHER SERINE-THREONINE PROTEIN KINASE 1 70 - -
Trme91065g00001 91 Gene3D Transferase(Phosphotransferase) domain 1 1 89 - -
Trme91065g00001 91 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme91065g00001 91 Pfam Protein tyrosine and serine/threonine kinase 1 79 IPR001245 GO:0004672|GO:0006468
Trme91065g00001 91 SUPERFAMILY Protein kinase-like (PK-like) 1 70 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91065g00001 Trme-Chr91065 194 572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91065g00001 1 87 MAP Kinase Kinase Kinase AT3G46920 81.609 3.43e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Trme91065g00001 PK_Tyr_Ser-Thr 1.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91065g00001 - - sspl:121809564 149.058