Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9105g00001 ATATGGCCAGAGTCTCCAAGTTTTAGAGATGAGGGTATAGGGAAGATTCCTTCAAAATGGAAAGGAGTTTGCATGGAAGGTCATGATTTCAAGAAATTTAATTGCAATAGAAAATTGATAGGTGCAAGATACTATGGTAAGAAAGATCCCAAAGGTTCCCCAAGAGATTTTAATGGACATGGGAGCCACACTGCATCAACAGCAGCTGGTGTCATTGTTAACAATGCTAGTTACTATGGTTTAGCAAAAGGAATAGCAAGAGGTGGTTCACCTTCTGCAAGGATTGCTGCCTATAAAGCATGCACAGAAAAAGGTTGCTCTGGTGGAACATTATTGAAGGCTATTGATGATGCTATCAAGGATGGAGTAGATATAATCTCAATCTCTATTGGATTTAGCTCAGAATTTCTATCAGAATATTTGAGTGATCCAAT 434 0.3848 IWPESPSFRDEGIGKIPSKWKGVCMEGHDFKKFNCNRKLIGARYYGKKDPKGSPRDFNGHGSHTASTAAGVIVNNASYYGLAKGIARGGSPSARIAAYKACTEKGCSGGTLLKAIDDAIKDGVDIISISIGFSSEFLSEYLSDP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9105g00001 144 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 135 IPR045051 -
Trme9105g00001 144 Gene3D Peptidase S8/S53 domain 1 135 IPR036852 GO:0004252|GO:0006508
Trme9105g00001 144 ProSiteProfiles Serine proteases, subtilase domain profile. 1 144 - -
Trme9105g00001 144 Pfam Subtilase family 45 131 IPR000209 GO:0006508|GO:0008236
Trme9105g00001 144 SUPERFAMILY Subtilisin-like 1 136 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9105g00001 Trme-Chr9105 745 1778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9105g00001 1 144 Subtilisin-like Serine Gene Family AT1G20150 58.667 2.38e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9105g00001 K25898 - lja:Lj0g3v0207979.1 219.55