Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91025g00001 ATGCTTCAAAGCTTGGTCCCTCGTCCACCTCTCACTTCCAAACCTAATAATAATATGAATGCCAAACGCGCCGAACGTGAACACGACGACGATGATTCCACCCTTCAGGAACAACCATCCTTCAAAAGACCTAACTACTCCGCCGAGAACACGGCGGTGGAAGCCGAAGAACACGACCAAGAACAAGCCTTCGAACCTGAAAACGAAGGCGAATCAACAGGTTTGAAACTCCTAGGGCTTTTGCTTCAATGCGCTGAGTGCGTTGCCATGGATAACCTCRATTTYGCYAACGRCYTGTTACCGGAGATTACCGAGCTTTCCTCACCGTTCGGRACTTCGCCGGAGCGCGTSGGAGCTTATTTYGCACAGGCGTTACAAGCGCGTGTGGTGAGTTCTTGTCTCGGTAGTTACTCACCGTTAACCGCTAAATCGGTAACCCTAACTCAGTCGCAAAGAATCTTCAACGCGTTTCAATCTTACAACTCAGTTTCACCGTTGGTGAAATTCTCGCACTTCACCGCTAATCAAGCAATCTTCCAAGCCGTGGACGGTGAGGATCGTATCCACATCATCGACCTCGATATCATGCAAGGACTTCAATGGCCAGGATTGTTCCACATCCTCGCTTCACGATCCAAGAAAATTCGCTCCGTTAGAATCACCGGT 666 0.488 MLQSLVPRPPLTSKPNNNMNAKRAEREHDDDDSTLQEQPSFKRPNYSAENTAVEAEEHDQEQAFEPENEGESTGLKLLGLLLQCAECVAMDNLBFANXLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQAVDGEDRIHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91025g00001 222 MobiDBLite consensus disorder prediction 20 37 - -
Trme91025g00001 222 Pfam GRAS domain family 79 222 IPR005202 -
Trme91025g00001 222 ProSiteProfiles GRAS family profile. 68 222 IPR005202 -
Trme91025g00001 222 MobiDBLite consensus disorder prediction 1 70 - -
Trme91025g00001 222 MobiDBLite consensus disorder prediction 1 19 - -
Trme91025g00001 222 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 222 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91025g00001 Trme-Chr91025 61 726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91025g00001 67 222 GRAS Transcription Factor Family AT5G41920 70.701 5.92e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme91025g00001 GRAS 1.4e-48 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91025g00001 - - gmx:100816249 327.02