Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme910003g00001 ATGACTGAAACTGACTTCTCAAGCCTCCCTTATCTACAATCTGTAGCCAAAGAGGCTCTAAGGTTGCACCCCCCAACACCATTAATGCTCCCACATCGCGCTAATGCCAATGTCAAAATCGGTGGCTATGATATTCCCAAAGGATCCAATGTCCATGTAAATGTATGGGCTGTCGCCCGTGATCCAGCTGTGTGGAAAAACGCAACT 207 0.4734 MTETDFSSLPYLQSVAKEALRLHPPTPLMLPHRANANVKIGGYDIPKGSNVHVNVWAVARDPAVWKNAT 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme910003g00001 69 SUPERFAMILY Cytochrome P450 2 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme910003g00001 69 Gene3D Cytochrome P450 1 69 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme910003g00001 69 PANTHER CYTOCHROME P450 98A9 1 68 - -
Trme910003g00001 69 Pfam Cytochrome P450 2 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme910003g00001 Trme-Chr910003 1 207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme910003g00001 1 67 Monolignol Biosynthesis Gene Families AT2G40890 86.567 3.15e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme910003g00001 K09754 - tcc:18598608 139.813