Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9081g00001 AGTGCAGTTTTGGCATTGGATTCTGCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACCAAGGAAGAGATGGAGATACTGAAGAACTATGCTGGGAACMAGGATATGCTTGGGAAGTGTGAGCAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAAGCCAAGTTAAGAGTGTTTGCTTTTAAAATCACCTTTTCTGCTCAGGTGAGCGATTTAAGGATAAATTTGAATACAATCAATGATGCAACCAGAGAGGTCAAAGAATCGGTAAAATTGCGTCAAATAATGCAGACTATTCTTACGTTGGGCAATGCTTTGAATCAGGGAACAGCACGAGGATCAGCYGTAGGATTCAAATTGGACAGCCTTCTCAAATTATCTGATACCCGTGCAAGAAATAATAAAATGACTTTAATGCACTATTTGTGTAAGACTATCCCGATGTAA 465 0.3978 SAVLALDSAVLDIDQVENLIKFCPTKEEMEILKNYAGNXDMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSAQVSDLRINLNTINDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKTIPM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9081g00001 154 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 152 - -
Trme9081g00001 154 Pfam Formin Homology 2 Domain 2 152 IPR015425 -
Trme9081g00001 154 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 154 IPR015425 -
Trme9081g00001 154 Gene3D Formin, FH2 domain 1 153 IPR042201 -
Trme9081g00001 154 PANTHER FORMIN-J 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9081g00001 Trme-Chr9081 547 1726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9081g00001 1 152 FH2 protein (formin) Gene Family AT1G31810 85.526 2.45e-86 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9081g00001 - - pcin:129311237 273.863