Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9078g00001 CCGCAGCCTTGCAGGCTATGTTGTGCCATTTTTAGATCGCTAAAAGAATCTGACCTAGCTAATGTAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTACGCATTTGGAGTAGTTTTGATGGAACTGATCACGGGTAGAAAGGCATTAGATGATACTGTGCCTGGTGAAAGGTCTCATTTGGTTACTTGGTTCCGTAGGGTACTGATTAACAAGGAAGAAGACATTCCAAAGGCAATTGATCAAACTCTCGACCCAGATGAAGAAACAATGTTGAGCATATATAAAGTGGCTGAGCTGGCTGGCCATTGCACCGTTCGTGAACCATATCAAAGGCCAGATATGGGGCATGCCGTGAATGTGTTGGGTCCCCTTGTGCAGCTATGGAAACCTACTACCCAAACAGACGAAGGAAATTATGGCGTTGACAATCAGATGAGTCTTCCTGAAGCACTACAAAGGTGGCAAGCCGGCACTTCAACAATATTTAATGACATGTCCTTCTCACAAACCCAAACAAGTTCTAAATCTCCATCATTTGCAGGCAACTTTGATTCACCGGATTGCCGGTAG 573 0.4468 PQPCRLCCAIFRSLKESDLANVATGRVTTKVDVYAFGVVLMELITGRKALDDTVPGERSHLVTWFRRVLINKEEDIPKAIDQTLDPDEETMLSIYKVAELAGHCTVREPYQRPDMGHAVNVLGPLVQLWKPTTQTDEGNYGVDNQMSLPEALQRWQAGTSTIFNDMSFSQTQTSSKSPSFAGNFDSPDCR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9078g00001 190 PANTHER OSJNBA0070M12.3 PROTEIN 22 190 - -
Trme9078g00001 190 ProSiteProfiles Protein kinase domain profile. 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme9078g00001 190 SUPERFAMILY Protein kinase-like (PK-like) 24 131 IPR011009 -
Trme9078g00001 190 MobiDBLite consensus disorder prediction 169 190 - -
Trme9078g00001 190 Gene3D Transferase(Phosphotransferase) domain 1 17 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9078g00001 Trme-Chr9078 270 1195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9078g00001 24 122 Receptor kinase-like Gene Family AT5G56890 44.444 7.37e-17 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Trme9078g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9078g00001 K00924 - qsa:O6P43_002591 271.166