Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90780g00001 GGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGAGACACGGATGTTGGAGAATATATTGTGCCAATACCACATGTTAAGCAAGTGAAACTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTAATGATACGGCTGCCATGTCATGTCGGGGTCTACCTGCAGAGCTTGCTGCTAAGCTAGTGGTTAAGGAAGCTCTTAGATCTAGAGGCCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCTGACCACTCTGTATTACCACCAACTCCAAGAAAGAAAAATAATATGCTAACCGCGCTTCTCTTTGGAAAGAAATCTGAGAACTCTACAAACAAAGCTACTAGCAAGCTTTCTGCAGTTGGTGTTGTTGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTATAGAAAG 464 0.431 GPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSNDTAAMSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHSVLPPTPRKKNNMLTALLFGKKSENSTNKATSKLSAVGVVEELFEEGSAMLIE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90780g00001 154 CDD PP2Cc 6 96 IPR001932 -
Trme90780g00001 154 PANTHER PROTEIN PHOSPHATASE 6 95 IPR015655 GO:0004722|GO:0006470
Trme90780g00001 154 ProSiteProfiles PPM-type phosphatase domain profile. 1 96 IPR001932 -
Trme90780g00001 154 Pfam Protein phosphatase 2C 10 79 IPR001932 -
Trme90780g00001 154 Gene3D - 1 99 IPR036457 -
Trme90780g00001 154 SUPERFAMILY PP2C-like 8 96 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90780g00001 Trme-Chr90780 60 726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90780g00001 1 154 PP2C-type Phosphatase Gene Family AT1G09160 74.675 9.55e-78 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90780g00001 - - qsa:O6P43_007451 286.96