Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90675g00001 ATGAGCAATCTCTTACAATCACTGTTTGTTGGAGTATCAGTGTTTGCTATGCCTGTCATAAAAAAGATTCCAACTTCTGTTTTGTGGGGATATTTTGCATACATGGCCATTGATAGTCTTCCTGGTAACCAATTCTGGGAAAGGATATTACTTCTCTTTGTAACACCTAGTAGGTGGTTCAAGTTATTGGAAGGTCACCATGCTTCTTTTGTGGAATCAGTACCAATTAGATACATAATCTTCTTCACAATATTCCAATGTGTGTATTTTATGGTTTGTTTTGGAGTGACATGGATTCCAATAGCTGGAATCTTGTTCCCTCTGCCTTTCTTCTTACTGATCTTGGTGAGGCAGTATATTCTCCCCAAGATGTTTAGTCCTCACCACCTAAGAGAACTTGATGCAGCTGAATATGAAGAAATTGTTGGTGCTCCAAGACTCTCATTAAGT 450 0.3844 MSNLLQSLFVGVSVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWFKLLEGHHASFVESVPIRYIIFFTIFQCVYFMVCFGVTWIPIAGILFPLPFFLLILVRQYILPKMFSPHHLRELDAAEYEEIVGAPRLSLS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90675g00001 150 PANTHER ANION EXCHANGE PROTEIN 1 141 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme90675g00001 150 Pfam HCO3- transporter family 2 84 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90675g00001 Trme-Chr90675 22 621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90675g00001 1 146 Antiporters AT1G15460 71.918 5.64e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90675g00001 K24194 - gmx:100811184 260.766