Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90669g00001 GTCCTGGTAACTGGATATTTTCACAATGATTATCAACACCTTGCAAAGTCCAATCTAGTGTGCGTCTGCGGCGAAGCAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGCTATCACCGCATTCTCCTGGATTCGTAAATCTTTATTTGAGCTTCGATGGCCATAAACCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTATTTTGCACGATCCTGCTGCTTCAATGGAAGAGTCATACAACTGGATTGAGTTTCGACTTCAGATGAGGCTTTCTAATTTGCTTTTTACAACACCAAAGACCATTGATGTTTTCTCTAGTAAAGTATCACCTACTGCACTGAAAGAGACTAAAAAGTTTGCCTCCAAAACATTATTTATTTCCAAAAGTTTGAAACACTTTATGAAGTCGTCTGACGCAAACGCAATTCCATATCCGCATGCAAAAAATACCTTGTTCGAAATTGCATTGAAAAACAAACTAAGGGAATGGCTTTTGGAACGAATTGTCTTAGGATGCAAGACTACTGAGCCTGTCGCTTGA 561 0.3957 VLVTGYFHNDYQHLAKSNLVCVCGEASVPVEIVQVGVYRCWLSPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPAASMEESYNWIEFRLQMRLSNLLFTTPKTIDVFSSKVSPTALKETKKFASKTLFISKSLKHFMKSSDANAIPYPHAKNTLFEIALKNKLREWLLERIVLGCKTTEPVA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90669g00001 186 Gene3D Immunoglobulins 1 74 IPR013783 -
Trme90669g00001 186 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 180 - -
Trme90669g00001 186 SUPERFAMILY E set domains 1 71 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90669g00001 Trme-Chr90669 59 702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90669g00001 1 183 CAMTA Transcription Factor Family AT4G16150 50.543 5.35e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90669g00001 K21596 - gmx:100776839 285.034