Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9064g00001 GCTCGGATTAAGAAGATTATGCAAGCAGATGAGGATGTTGGAAAGATAGCATTGGCAGTTCCTGTTTTAGTTTCAAAAGCTCTGGAGTTATTTTTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTACAGAGAGGAGCAAAGACCATGAATGCATTGCATTTGAAACATTGTGTACAAAGCTACAATGTCTTTGACTTTTTGAGAGACATCGTCAGCAGGGTTCCCGACTATAGCCACGGCCACGCCCACGCTCATGCTGAGCCTGGAGCTGATGATCGCGCCCTTCCAAAGAGAAGGAAAGCTGGCGGTGATGATGGTAATGACAGTGATGACGAGGCTAAGCGGAGTAAGATGCATGAGTCAGGCCACACTGGCGGTACTGGTAGGGGAAGAGGAAGAGGCAGAGGAAGAGGCCGTGGTCGAGGGGCTCGAGCCGCAGAAAGAGAAGCCTTACATCAGCAGGTTGAACCCGAACCTTGCACCTCGATGCAACAAAGTAGCAAAGAAGTCTCTAATACAAGTATGGCAATAGATAATGGTCCAGAATCAAAGCAGTTATCAAAAGAAAATAATACAGTTCATGAGGAAAGCACTCAATCTCTTCGAAACATTGATCTGAATGCAAGTATACATGAAAACGAGGACAAAAACAATACAAGCATGGCTACTACTCAGGCCTCATTGCCTGAACCTGCTGCAACAACAGATATGCAACATGAAGAAATTCCCGGTTGGTCCCTTCCTGATGTAGACAAGATGGCGATCGACACATTGCAGCTTGCAGCAAACCTTGGTAATAGGATAGAAGAGGAGGAAGATTATGATGAGGAAGGGTAA 843 0.4555 ARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYSHGHAHAHAEPGADDRALPKRRKAGGDDGNDSDDEAKRSKMHESGHTGGTGRGRGRGRGRGRGRGARAAEREALHQQVEPEPCTSMQQSSKEVSNTSMAIDNGPESKQLSKENNTVHEESTQSLRNIDLNASIHENEDKNNTSMATTQASLPEPAATTDMQHEEIPGWSLPDVDKMAIDTLQLAANLGNRIEEEEDYDEEG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9064g00001 280 MobiDBLite consensus disorder prediction 142 156 - -
Trme9064g00001 280 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 60 IPR003958 -
Trme9064g00001 280 MobiDBLite consensus disorder prediction 81 128 - -
Trme9064g00001 280 MobiDBLite consensus disorder prediction 81 240 - -
Trme9064g00001 280 MobiDBLite consensus disorder prediction 159 234 - -
Trme9064g00001 280 FunFam dr1-associated corepressor homolog 1 75 - -
Trme9064g00001 280 Gene3D Histone, subunit A 1 75 IPR009072 GO:0046982
Trme9064g00001 280 SUPERFAMILY Histone-fold 7 76 IPR009072 GO:0046982
Trme9064g00001 280 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9064g00001 Trme-Chr9064 367 1749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9064g00001 1 270 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.822 2.96e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Trme9064g00001 CBFD_NFYB_HMF 4.6e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9064g00001 K21752 - gmx:100810093 370.548