Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90547g00001 ATGTTTCCTTGCATCATTGCAAGAGGCTCAACAAATGAAGTGATATCAAATGGAATAAATGGAACTAGAAATGGTGCACTTCAACTAATGCAAGCTGAACTTCATGTACTATCGCCTTTGGTTCCGGTTCGCGAGGTAAATTTCCTTAGGTTTTGCAAGCAGCATGCAGAAGGTGTTTGGGCTGTGGTTGATGTGTCCATAGATAGCATAAGAGAAACTTCTGGAGCTACAAGTTTTATGAACTGTAGGAAGCTTCCTTCTGGTTGTGTTGTGCAAGATATGCCTAATGGTTACTCCAAGGTAATTAATTAA 312 0.4006 MFPCIIARGSTNEVISNGINGTRNGALQLMQAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRETSGATSFMNCRKLPSGCVVQDMPNGYSKVIN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90547g00001 103 ProSiteProfiles START domain profile. 1 103 IPR002913 GO:0008289
Trme90547g00001 103 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 102 IPR042160 -
Trme90547g00001 103 Pfam START domain 7 102 IPR002913 GO:0008289
Trme90547g00001 103 SUPERFAMILY Bet v1-like 10 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90547g00001 Trme-Chr90547 59 562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90547g00001 1 101 Homeobox Transcription Factor Family AT4G00730 74.257 3.55e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90547g00001 K09338 - gmx:100811873 187.578