Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90418g00001 GCTGTTGGAACTCCAAATAGTGTTAATGATAATGATAAAACAGGTTTGATTATGCTTGGTTGTGCATGTAAAGATGAGCTAGGCATTGCACACCGTCATTGCGCTGAGGCATGGTTCAAGATTAAAGGAAACAGGGATTTGTATGGACTCTTGGGACCTATTTGGTTTGAGAAAATTGTCTCTTTGGATGTTTTGATTTAA 201 0.3831 AVGTPNSVNDNDKTGLIMLGCACKDELGIAHRHCAEAWFKIKGNRDLYGLLGPIWFEKIVSLDVLI 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90418g00001 66 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 48 IPR013083 -
Trme90418g00001 66 PANTHER ZINC FINGER, RING-CH-TYPE 13 45 - -
Trme90418g00001 66 SMART ringv_2 9 45 IPR011016 GO:0008270
Trme90418g00001 66 SUPERFAMILY RING/U-box 14 44 - -
Trme90418g00001 66 Pfam RING-variant domain 13 43 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90418g00001 15 45 C3H Transcription Factor Family AT2G37950 67.742 4.70e-12 56.2