Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9038g00001 ATGTTCATTGCAGGAACAAATGGACCAGCAAGTGTGTTAGAATGGGCACTAGCAGAGCTAATAAGAAATCCACATGTTTTCATGAAAGCAAGAGAAGAAATTGATTCTGTTGTTGGTAAAGAAAGACTTGTTAAAGAATCAGATATACCAAATTTACCTTATCTTCAAGCAGTAGTTAAAGAAACTCTTAGAATGCATCCACCAACTCCAATATTTGCAAGAGAAGCTATAAGAAGTTGCCAAGTTGATGGATATGATGTTCCAGAACATTCAAAGATTTTCATCAATGCTTGGGCTATTGGTAGAGATCCTAACTATTGGGACAATCCATTAGTCTATGACCCTGAAAGATTCTTCATCAATGATGATCCTAACAAGAGTAAAATTGATGTTAGAGGACAATATTATCAACTTTTGCCATTTGGTAGTGGGAGAAGAAGTTGTCCTGGTGCTTCACTTGCTTTGCTTGTTATCCAAGCAACACTTGCAAGTTTGATACAATGCTATGATTGGGTTGTTAATGATGGTAAGAATCATGATCTTGATATGTCTGAGGTAGGAAGGGTTACTGTGTTTTTGGCCAAACCACTTAAGTGCAAGCCTGTTCCACATTTTGTTCCATTCTCTGCTTGA 633 0.3712 MFIAGTNGPASVLEWALAELIRNPHVFMKAREEIDSVVGKERLVKESDIPNLPYLQAVVKETLRMHPPTPIFAREAIRSCQVDGYDVPEHSKIFINAWAIGRDPNYWDNPLVYDPERFFINDDPNKSKIDVRGQYYQLLPFGSGRRSCPGASLALLVIQATLASLIQCYDWVVNDGKNHDLDMSEVGRVTVFLAKPLKCKPVPHFVPFSA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9038g00001 210 FunFam Predicted protein 2 199 - -
Trme9038g00001 210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 141 150 IPR017972 GO:0005506|GO:0016705
Trme9038g00001 210 SUPERFAMILY Cytochrome P450 1 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS P450 superfamily signature 139 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 Gene3D Cytochrome P450 1 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS E-class P450 group I signature 148 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS E-class P450 group I signature 96 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PRINTS E-class P450 group I signature 138 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 Pfam Cytochrome P450 1 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme9038g00001 210 PANTHER CYTOCHROME P450 98A9 2 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9038g00001 Trme-Chr9038 561 1193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9038g00001 1 203 Cytochrome P450 AT5G47990 44.828 1.64e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9038g00001 K24188 - gmx:100037459 380.948