Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90284g00001 ATGGCATCATTTAATTCAAACCGAACAGTTTCAAAAGACAACGTGCCTAAGGGATATCTTGCAGTGTATGTTGGAGACAAACAAAAGCGGTATGTGATCCCCGTATCGTACTTGAACCAACCGTTGTTTCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCAACGGGTGGCCTCACTATTCCTTGCACCGAAGATGTCTTTCAACATATAACATCTCGCTTCAATGGACTATGA 249 0.4217 MASFNSNRTVSKDNVPKGYLAVYVGDKQKRYVIPVSYLNQPLFQDLLSQAEEEFGYDHPTGGLTIPCTEDVFQHITSRFNGL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90284g00001 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 78 IPR003676 GO:0009733
Trme90284g00001 82 Pfam Auxin responsive protein 9 77 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90284g00001 Trme-Chr90284 271 519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90284g00001 14 75 Calmodulin-binding Proteins AT3G43120 53.226 4.56e-20 77.0