Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme902530g00001 CTTAATGTTATTCGTATTGTCAACGAACCCACCGCTGCTGCCCTTGCCTATGGCCTTGACATGGGAGACACCGGTGACGGTGATGGTGATGGTGATGGTGACGGTGACGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGATGATGATGATGAGAAGGGTGTGCTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTAAACATTGAGTCCAGTGTC 231 0.4892 LNVIRIVNEPTAAALAYGLDMGDTGDGDGDGDGDGDGDGDGDGDGDGDDDDDEKGVLIFDLGGGTFDVSLLNIESSV 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme902530g00001 77 ProSitePatterns Heat shock hsp70 proteins family signature 2. 58 71 IPR018181 -
Trme902530g00001 77 MobiDBLite consensus disorder prediction 18 56 - -
Trme902530g00001 77 SUPERFAMILY Actin-like ATPase domain 51 75 IPR043129 -
Trme902530g00001 77 Pfam Hsp70 protein 1 75 IPR013126 GO:0005524|GO:0140662
Trme902530g00001 77 Gene3D - 1 28 - -
Trme902530g00001 77 MobiDBLite consensus disorder prediction 25 55 - -
Trme902530g00001 77 Gene3D - 46 77 - -
Trme902530g00001 77 PANTHER HEAT SHOCK PROTEIN 70KDA 1 74 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme902530g00001 Trme-Chr902530 2 232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme902530g00001 1 74 Calmodulin-binding Proteins AT5G02500 52.703 5.04e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme902530g00001 K09490 K03283 yli:YALI0E13706g 66.6254