Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90221g00001 TTCGACAAGCACATTCGCTATGAATCAAGGAAGGCTAGGGCTGATACGAGAAAGAGAGTGAGAGGGCGATTTGTTAAGGCAAGTGATACAAGTGATAATCAAGAATGA 108 0.4259 FDKHIRYESRKARADTRKRVRGRFVKASDTSDNQE 35
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90221g00001 35 ProSiteProfiles CCT domain profile. 1 27 IPR010402 GO:0005515
Trme90221g00001 35 Pfam CCT motif 1 27 IPR010402 GO:0005515
Trme90221g00001 35 MobiDBLite consensus disorder prediction 1 28 - -
Trme90221g00001 35 MobiDBLite consensus disorder prediction 1 35 - -
Trme90221g00001 35 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90221g00001 1 32 C2C2-CO-like Transcription Factor Family AT3G21880 78.125 2.50e-12 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme90221g00001 CCT 2.6e-12 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90221g00001 - - ahf:112697135 63.929