Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90177g00001 GTCCTTTCTGTGTATGATAATGGCTCTGTTTTCAGCCCTGAGGTTCTTGATCTTACCGAGGATGACCTTATTGCAAAGTTTGCTATTGGTGTTTCAATGGTTACTTCACTTTCGTTGGCCATCTCTTACCCAACACTTGCTGCCGCACCTCATATGTTCGTCAATGCCTACAAGAATGTTCTTTCTGTTGCAGTGGCAACTGAATATTCTTTCCCTGAGGCTGACAAGGTTAAGGAGTTCTTAAAGGACCCAAGTAAGTTTGCTGTAGCTGCTGTTGCTGCCCCCGCTGCTGCTTCTGGTGCTGCCCCTGCAGCAGCCAAGGAGGAGGAGAAGAAGCCTGAGCCAGAAGAAGAATCTGATGAAGAAATGGGTTTTGGTCTCTTTGATGAATAG 393 0.4656 VLSVYDNGSVFSPEVLDLTEDDLIAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLSVAVATEYSFPEADKVKEFLKDPSKFAVAAVAAPAAASGAAPAAAKEEEKKPEPEEESDEEMGFGLFDE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90177g00001 130 MobiDBLite consensus disorder prediction 97 130 - -
Trme90177g00001 130 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 111 - -
Trme90177g00001 130 Pfam 60s Acidic ribosomal protein 43 128 - -
Trme90177g00001 130 MobiDBLite consensus disorder prediction 114 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90177g00001 Trme-Chr90177 251 729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90177g00001 3 128 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 71.429 1.83e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90177g00001 K02941 - gmx:547816 166.777