Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90101g00001 ATGAGAAATGCTAATTTTCAAGGGATTGGTTTTGGTGAGGAATGTGTTGGTGAAGTGAAAGCTATGCTTGATGAACATGCTGCTGGTTGGGGATTGAAGAAAGAAGATGAATGTATTGTGCTTACTTGGAAAGGGCATAATGTTGTTTTTGCTTCTGCTTGGTTACCTGCTTAA 174 0.3908 MRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDECIVLTWKGHNVVFASAWLPA 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90101g00001 57 ProSiteProfiles GRAS family profile. 1 55 IPR005202 -
Trme90101g00001 57 Pfam GRAS domain family 1 54 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90101g00001 Trme-Chr90101 267 440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90101g00001 1 56 GRAS Transcription Factor Family AT3G49950 62.069 1.30e-21 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme90101g00001 GRAS 3.3e-08 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90101g00001 - - vvo:131643723 122.479