Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme900g00001 ATGAATCCATATTTATGGGTGATGTGCAATGATATGGAGGAAGGAGGGAATTTTCTTCCTACATTGATGGCGCTTAAAGCAGTTGAACCCAATGAGAGTTCATTGGAAGTAATTCTTATTGATAGACGTGAGGATTCTCGTCTTAAGGTGCTTCAAGATAAAGCTCAAGAATTGTATTCTGCTTCTGAGAATGCCTTGGTTCTTGTTGAGAAGCTTGGAAAACTTGTTGCTATATTTATGGGGGGCACCTTCCCTGTGGAGCAAGGGGATATGCAAAAGAGGTGGAAGATGGTTAGTAAGCGGTTGAGGAATTTTCATCAGTGTGTTGTGCTTCCAATTGGTAGTTTGTCTACGGGACTCTGTAGGCATCGCGCAATTCTCTTCAAGAGATTGGCAGATTATATAGGTTTGCCATGCCGCATAGCTCGAGGTTGCAGGTACTGTGCTTCGGATCATCAATCATCTATTCTTGTGAAGATTAAAGATGACAGGCAACTGTCAAGGGAGTATGTTGTTGACCTGGTTGGGGAACCAGGAAATATTCTTGGGCCAGATTCATCAATTAATGGAGCATATGTGTCTTCCATACCTTCCCCATTTCAAATTTCTCATTTGAGAGATTCTCAATCGCCCTATGCGGATGATGCAGCATCTTCTCAAGTTATATGTTTTAATCAGAATTCTCCCAACAATCACCTGTATTCAGGCCATCTACAGGAAGATCAACAACATAAAGAAACTAATTTGTACAAAAATAATAATAATGGCTTCAATTATGCTTCAGTTGATCAAACTTGTGGAGGTGTTTCTCAAGCTCTTCGCCCAGCCTCTGAAGCATTATTACATGAAATTCCATTTGTTGGTAAAGATTCAGTTGTAGTCAAAGAAATTTCTTACAATGAGATCATTGCAAATGGAAGTTCGGTGGTAAATGGTATCCGGTCAAAGCTGGAACAGGTAGACAATAGGCTTGAAAACCAGGGTGCTGGGGATATTCCAAAATATGTGAATCTTGAACCATCACTAGCAATGGACTGGCTTGAAATATCATGGGATGAGTTACGGATCAAAGAGCGCATTGGTGCTG 1087 0.4075 MNPYLWVMCNDMEEGGNFLPTLMALKAVEPNESSLEVILIDRREDSRLKVLQDKAQELYSASENALVLVEKLGKLVAIFMGGTFPVEQGDMQKRWKMVSKRLRNFHQCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHQSSILVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYVSSIPSPFQISHLRDSQSPYADDAASSQVICFNQNSPNNHLYSGHLQEDQQHKETNLYKNNNNGFNYASVDQTCGGVSQALRPASEALLHEIPFVGKDSVVVKEISYNEIIANGSSVVNGIRSKLEQVDNRLENQGAGDIPKYVNLEPSLAMDWLEISWDELRIKERIGA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme900g00001 362 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 68 185 - -
Trme900g00001 362 Pfam Ethylene-responsive protein kinase Le-CTR1 4 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme900g00001 Trme-Chr900 52 3052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme900g00001 1 362 MAP Kinase Kinase Kinase AT4G24480 51.989 9.92e-124 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme900g00001 - - vvo:131620676 619.772