Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90079g00001 ATGTGGATTTGTCATGATTGGAGTGATGAGCACTGCTTGAAATTTTTGAAGAACTGTTATGAGGCACTTCCAGACAATGGAAAAGTGATTGTGGCAGAATGCATTCTTCCAGTGGCACCAGACACAAGCTTGGCAACAAAAGGTGTGGTTCACATTGATGTGATCATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACACAGAAAGAGTTTGAAGATCTTGCCAAAGGTGCTGGATTCAAAGGCTTCAAAGTTCACTGTTCTGCTTTCAACACATACATCATGGAATTTCTTAAGAAGGTTTAA 306 0.4085 MWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDTSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFKGFKVHCSAFNTYIMEFLKKV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90079g00001 101 Pfam O-methyltransferase domain 2 81 IPR001077 GO:0008171
Trme90079g00001 101 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 97 IPR029063 -
Trme90079g00001 101 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 99 IPR016461 GO:0008168
Trme90079g00001 101 PANTHER O-METHYLTRANSFERASE 1 83 IPR016461 GO:0008168
Trme90079g00001 101 Gene3D Vaccinia Virus protein VP39 1 101 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90079g00001 Trme-Chr90079 176 603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90079g00001 2 101 Monolignol Biosynthesis Gene Families AT5G54160 74.000 1.15e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90079g00001 K13066 - gmx:100777636 201.445