Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme90054g00001 GGTGTTTTGAAGGTCAACCAATTCATTGAAGTTCGACCTGGGATAGTTGTTAAAGACGAGAGCGGAAATATTAAATGCACACCTATATACTCTAGAATAGTTTCATTGTTTGCTGAACAAAATGAGCTTCAATTTGCTGTGCCTGGAGGCCTAATTGGTGTTGGAACAACAATGGATCCCACTTTGACGCGTGCTGACAGATTGGTAGGGCAAGTTCTCGGAGAGGTTGGATCACTGCCCGAGGTTTTCGTTGAGCTTGAGGTAGGTGGCTAA 273 0.4432 GVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVGG 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme90054g00001 90 Gene3D Translation factors 1 79 - -
Trme90054g00001 90 Pfam Elongation factor Tu domain 2 1 73 IPR004161 GO:0005525
Trme90054g00001 90 FunFam Eukaryotic translation initiation factor 2 subunit gamma 1 79 - -
Trme90054g00001 90 SUPERFAMILY Translation proteins 1 77 IPR009000 -
Trme90054g00001 90 CDD eIF2_gamma_II 1 77 IPR044127 GO:0000049
Trme90054g00001 90 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme90054g00001 Trme-Chr90054 305 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme90054g00001 1 89 Eukaryotic Initiation Factors Gene Family AT1G04170 87.640 5.56e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme90054g00001 K03242 - cit:102610642 174.096