Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89993g00001 ATGTTGAGCAGGATCATGGTTGGTCTGCCATCTGTTGAGAATAGGGAAATGATCCTTAAAACTCTTCTGTCGAAGGAAAAACACGAAAACTTAGACTTCAAAGAATTAGCAACCATGACAGAAGGATTTAGTGGAAGTGATCTTAAGAATTTGTGCATCACTGCAGCGTATCGACCTGTTAGGGAGTTAATACAGCAGGAGCGAAATAAGGAAATGGAAAAGAAGAAAAAAGAGGCCGAAAGTGTCAGCTCAGATGATGCTTCAAATAATAATGATAACGAAGAACGAGAAATTACCTTGAGGTCTTTAAACATGGAAGACATGAAACAAGCTAAGAATCAG 342 0.386 MLSRIMVGLPSVENREMILKTLLSKEKHENLDFKELATMTEGFSGSDLKNLCITAAYRPVRELIQQERNKEMEKKKKEAESVSSDDASNNNDNEEREITLRSLNMEDMKQAKNQ 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89993g00001 114 MobiDBLite consensus disorder prediction 64 114 - -
Trme89993g00001 114 MobiDBLite consensus disorder prediction 64 103 - -
Trme89993g00001 114 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 114 - -
Trme89993g00001 114 Gene3D - 8 113 - -
Trme89993g00001 114 Pfam AAA+ lid domain 30 73 IPR041569 -
Trme89993g00001 114 Coils Coil 60 80 - -
Trme89993g00001 114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 71 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89993g00001 Trme-Chr89993 72 590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89993g00001 5 66 Calmodulin-binding Proteins AT3G56690 37.500 1.28e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89993g00001 - - lja:Lj0g3v0359209.2 172.555