Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8987g00001 ATGGATAAGTGGGGTGTTAATCATCAACAGGCATTCATTGGTTGGCGTGGGAAAAGTAGAAGAAATTTTTCTGCTGTTACTAACGAGCAAGAGGAATCAGACAATGACGAAGAGAAAGAACAAGAAGTAACTATTAAAAATGAACCTATCTTTTTTCCAGATATTAGGAAAAGGAAGCGCCTCAGCCTTAGTCAGCTTAGAGAGGGGAAAGAGGAGTCGTCTGGGACGCTTAGTCAGCTTAGTGAAGTGAAAGTGGAGTCTTGTGAGAAGTTTATTCAGCTTAGAGAGGTGAAAGAGGAGTATTGTGGTAAGGAAAGCAGTAGCAAGAATAAGAGAACGAAGCCTGTTGCTAAGGACAGATGGTCAGGCGAGAGGTACCAGTTGGCTGAGCAAACCATGTGGGAAGTGTTGAAGGCAGAAGGTGCGACTTTTGAAAATCCAATAACCCGACCTGCACTAAGAGCGGCTGCCCGTAAATTCATTGGTGATACTGGACTTTTAGACCACTTACTGAAGCACATTAGTGGTAAAGTGGCCCCTGGAGGCACTGATCGGTTTCGAAGATGGCACAACACCACGGGAGTCATGGAGTATTGGTTGGAGAGTGCTGACTTGGATGACATCCGCCAGGAGGCTGGAGTGCGTGACCGCTACTGGGTACCACCATCCACTGATAGGGCAATCCGTGCCTCTTCTCAGGATACTGATTCTTCTGGTGAATTGGAACTGCTTAAAAAAGAAATGGCTCAAATGAAGAAAGATATGCAGGAGCTCATTGCCAAGAAGGAAAAGAAAATTGAAAGTAACGTGATGGAGGAGATTTGCAAGGAATTTGGGAAGTGGAAAGCTATAACTGATCATCGCCTTACTGAAATCATGGCTTCTGTGAAGAATTTGCAGGGAAATTATGGTGAATTGATGAATTGGAAAACTGAAGTGGAGAAACATCTTATGGATATAACAGAAAAATTGAACGATCTTCAAGCAGCAAGAGAATGCACCACTTTTAGTCCTCCTTCAGACAAATGGAAAGAATGGTTAGCAGGCCCTAACCCAAACAATTTTCAGGAGGATGCATTGGCAACTTGGATTGGGAGTTCAGAGCTGCTTAATGTTCCGCAAGAGTGTTTGCCTGAATATCCCTGCGCAGGCATGCCAACTCAGCCACTCAATGAAGAACCCACTAACAAGAAGAG 1196 0.4431 MDKWGVNHQQAFIGWRGKSRRNFSAVTNEQEESDNDEEKEQEVTIKNEPIFFPDIRKRKRLSLSQLREGKEESSGTLSQLSEVKVESCEKFIQLREVKEEYCGKESSSKNKRTKPVAKDRWSGERYQLAEQTMWEVLKAEGATFENPITRPALRAAARKFIGDTGLLDHLLKHISGKVAPGGTDRFRRWHNTTGVMEYWLESADLDDIRQEAGVRDRYWVPPSTDRAIRASSQDTDSSGELELLKKEMAQMKKDMQELIAKKEKKIESNVMEEICKEFGKWKAITDHRLTEIMASVKNLQGNYGELMNWKTEVEKHLMDITEKLNDLQAARECTTFSPPSDKWKEWLAGPNPNNFQEDALATWIGSSELLNVPQECLPEYPCAGMPTQPLNEEPTNKK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8987g00001 398 Coils Coil 241 268 - -
Trme8987g00001 398 Coils Coil 310 330 - -
Trme8987g00001 398 PANTHER PROTEIN DYAD 1 364 IPR044221 GO:0007131|GO:0051177|GO:0051321
Trme8987g00001 398 MobiDBLite consensus disorder prediction 23 45 - -
Trme8987g00001 398 Coils Coil 28 48 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8987g00001 104 201 PHD Transcription Factor Family AT5G22260 36.893 2.23e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8987g00001 - - gmx:100806484 473.781