Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8977g00001 ATGATGAAGAGAGCTTATCTTGGTGTAAGGACAAAGATGAGAGAAGAACAAAGATATGAAGACACATGTAGAATGAGTTCAGCATCTGTTATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGAAATTACAGAGTTGTTGTGTGTAGAGATGGAATGGCTCATCAGAAAACTGACACATACCAACAATCAGCCAAACGACATTGGTCTCGCAGAATATTTTCAGCATATGAATCAGGAAATGAAGTAGCTACAAGGCATTCTAGCAGCTCAGAACTTGTCATCAGAAGTGAAAGTATTGATTCTAATACTGAATTTTTGATATTAGCAAGTAATGGTATATGGGAGGTGATGAAGAATCAAGAGGCTGTGAATCTAATAAGTCACATAGAAGATCCACAAGAAGCAGCTGAAT 421 0.3634 MMKRAYLGVRTKMREEQRYEDTCRMSSASVMVINGEKLVIANIGNYRVVVCRDGMAHQKTDTYQQSAKRHWSRRIFSAYESGNEVATRHSSSSELVIRSESIDSNTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8977g00001 140 SUPERFAMILY PP2C-like 2 140 IPR036457 -
Trme8977g00001 140 CDD PP2Cc 2 140 IPR001932 -
Trme8977g00001 140 PANTHER PROTEIN PHOSPHATASE 13 132 IPR015655 GO:0004722|GO:0006470
Trme8977g00001 140 Gene3D - 1 140 IPR036457 -
Trme8977g00001 140 ProSiteProfiles PPM-type phosphatase domain profile. 1 140 IPR001932 -
Trme8977g00001 140 Pfam Protein phosphatase 2C 92 139 IPR001932 -
Trme8977g00001 140 Pfam Protein phosphatase 2C 20 66 IPR001932 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8977g00001 7 140 PP2C-type Phosphatase Gene Family AT3G23360 52.174 2.34e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8977g00001 - K19704 gmx:100785227 211.46