Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89703g00001 TGGGGTGATGGATGTTGTAGAGAACCAAAGGAAGAAGAAGAAAAANNNNNNNNNNANNNNNNNNNNANTCTTAGTCATAACGTTGTTGAGAATGAAAAACAACAAAGATTAAGGAAAAGGGTGTTGCAGAAGCTTCATACAACATTTGGTGGTTCAGATGAAGACAATTATGCTTTTGGATTGGACCATGTTACTGATACAGAGATGTTCTTTCTTGCTTCAATGTATTTTTCTTTTCCTAATGGACATGGTGGACCAGGTCTCATTTGGCTAAATCTGTTGGATTTCAAACTATTGTTTTAG 303 0.3333 WGDGCCREPKEEEEKXXXXXXXXLSHNVVENEKQQRLRKRVLQKLHTTFGGSDEDNYAFGLDHVTDTEMFFLASMYFSFPNGHGGPGLIWLNLLDFKLLF 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89703g00001 100 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 1 88 IPR025610 -
Trme89703g00001 100 PANTHER MYC 1 87 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89703g00001 Trme-Chr89703 212 590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89703g00001 1 87 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 62.069 3.03e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89703g00001 - - gmx:100801502 127.487