Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8967g00001 GCCCACAAAAGGGTTCTTCTAGTTCTAGATGACGTTGATTCAACAAAGCAATTAGAAGAGCTTGCCGGAGGATGTGGTTGGTTTGGTTCTGGTAGCAGGATCATTATAACAACAAGGGACAAATCATTGGTAGATAAACATGTGAGGGATGGTTTTATCCTTGAAAAATATAAAATGGAAGCGCTGAATGATCATGACTCTCTAGAACTCTTTTGTTGGCATGCCTTCAAGACGAGTAATCCTGCAAAAAACTTTGAAGGTCTTTCTATTCTTGCCGTTAGTTATGCAAAGGGGGTTCCATTGGTTTTGAAACTAATGGGCTCCAATGTGAAGAGTTGGGTGCCAGATGATTGGGCAATGATATTGGAGCGTAGTATCAGAAAAACAAATGCGCGGAGTTCTTATGAAACTAAGGTCAAAGCTTGGACTCAGGGGAATGCTTTGGCCTCTGCTTATCACCCACTAAGAGAACAATGCAACAATGAAACGAGTGAACCTGAGCTTGTCACAAAGATTGTTGAAGACACATTTTCTAATCAACCTGTCCCTTTACCAATGAAACGAATAATTGGACTTGATACTCATTTTGAAATGGTGAAACCACTTCTGAATTTTGAGTCTCAGGATACCGTATTAACCCTTGAAATTTATGGACAGAGTGGAATAGGCAAAACCACATTTGCCTTGGATATCTATAACAAGATCAAGCATCAATTTGAAGCAGCGAGTTTTCTTGCTAATGTCAGAGAAAAATCAAACAAAGGCACTGAAGGCCTGGAAGATCTCCAGAAGACACTGCTATCTGATATGGGTGAGAAAACACAAACTATGTTAGAAAACTCATTTGAAGAAAGCTCTGAAATAAAACACAGGCTTGCCCACAAAAGGGTTCTTCTAGTTCTAGATGACGTTGATTCAACAAAACAATTAGAAGCACTAGCCGGAGGATGTGATTGGTTTGGTTCCGGTAGCAGGATCATCATAACAACAAGGGACAAATCATTGGTAGATAACGATGTGATGGATGGTTTTATCCTTGAAAAATATCAAATGGAAGAGATGAATTTTCAAGACTCTCTGGAACTCTTTTGTTGGCATGCCTTCAATATGTGTACTATTCCTGCAAAAAACTTTGAAGGTCTTTCTATTCGTTCCGTGATTTATGCAAAGGGTGTTCCATTGGTTTTGAAAACACTAGGCTCCGATGTGAAGGGTCAGAGCATGGATGATTGGGCAATCATATTGGGGCGATGTCCGAAGAATTCTTATAAAACTAAGGTCAAAGATCATCGTTCGGAGGATGATCAACCCTCTGATTATTATCACATACCAAGAATGGAACATTGGATTGAAACGTAA 1359 0.3959 AHKRVLLVLDDVDSTKQLEELAGGCGWFGSGSRIIITTRDKSLVDKHVRDGFILEKYKMEALNDHDSLELFCWHAFKTSNPAKNFEGLSILAVSYAKGVPLVLKLMGSNVKSWVPDDWAMILERSIRKTNARSSYETKVKAWTQGNALASAYHPLREQCNNETSEPELVTKIVEDTFSNQPVPLPMKRIIGLDTHFEMVKPLLNFESQDTVLTLEIYGQSGIGKTTFALDIYNKIKHQFEAASFLANVREKSNKGTEGLEDLQKTLLSDMGEKTQTMLENSFEESSEIKHRLAHKRVLLVLDDVDSTKQLEALAGGCDWFGSGSRIIITTRDKSLVDNDVMDGFILEKYQMEEMNFQDSLELFCWHAFNMCTIPAKNFEGLSIRSVIYAKGVPLVLKTLGSDVKGQSMDDWAIILGRCPKNSYKTKVKDHRSEDDQPSDYYHIPRMEHWIET 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8967g00001 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 150 423 IPR044974 GO:0006952
Trme8967g00001 452 Gene3D - 61 139 IPR042197 -
Trme8967g00001 452 Gene3D - 354 432 IPR042197 -
Trme8967g00001 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 424 IPR027417 -
Trme8967g00001 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 129 IPR027417 -
Trme8967g00001 452 Pfam NB-ARC domain 2 124 IPR002182 GO:0043531
Trme8967g00001 452 Pfam NB-ARC domain 197 412 IPR002182 GO:0043531
Trme8967g00001 452 Gene3D - 1 50 IPR027417 -
Trme8967g00001 452 Gene3D - 168 341 IPR027417 -
Trme8967g00001 452 PRINTS Disease resistance protein signature 213 228 - -
Trme8967g00001 452 PRINTS Disease resistance protein signature 291 305 - -
Trme8967g00001 452 PRINTS Disease resistance protein signature 389 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8967g00001 Trme-Chr8967 2 1613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8967g00001 162 401 WRKY Transcription Factor Family AT4G12020 30.488 4.02e-22 98.2