Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89661g00001 ATGCAGTCGATTCGGATTTATGCAGTCGATTTCTTCCAATATTCTTGTAGTGAATACAGACAAATATTTCATGCACTTCTTTCGGGTTGTTCGGCGGGTGGATTAGCTGCAATCCTGAATTGTGATAAATTCCGGTCTCTCCTTTCTACCAGTACTCGTGTAAAATGTGCTTCTGATGCTGGTTACTTTCCCCACTTGAAARATGTTTTAGGAGGATTCAGTTTTGCAAAGTACTTCGATAATATTGTCAAACTACATGGTTCTGCTAAGAATTTACCTAAGTCTTGTACATCAAAAATGAAACCAAAAAGTTTG 315 0.3746 MQSIRIYAVDFFQYSCSEYRQIFHALLSGCSAGGLAAILNCDKFRSLLSTSTRVKCASDAGYFPHLKBVLGGFSFAKYFDNIVKLHGSAKNLPKSCTSKMKPKSL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89661g00001 105 PANTHER NOTUM-RELATED 21 104 IPR004963 GO:0016787
Trme89661g00001 105 Pfam Pectinacetylesterase 24 102 IPR004963 GO:0016787
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89661g00001 24 103 Carbohydrate Esterase AT4G19410 61.250 5.69e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89661g00001 K19882 - dcr:108207537 162.155