Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89644g00001 ATGGATTTGTTAGAACATATAGTTACCGTTAGCTATGATCCAGATTTTACAGGTCCTAGAACTCTCATTCACTGTGTTCAGGAAGCTAGCCGTGGCTCCAAGGTGTATCGTGCAACTCTGTATTCTCCTTCGGGACGAAGAGAAAAGGATAAGGTGAATGAAATTCGTATGTACAGGGATCAGTTTTTGTTCAGCTGCTTGTTTTCTGTACCTGTGTTCGTGTTTGCCATGGTGCTTCCCATGCTTCCTCCATATGGCAACTGGTTGAACTATAAGGTCCATAATATGCTTACTCTTGGGTTGTTTTTAAGATGGATCCTTTGCACACCTGTGCAGTTCATAGTTGGAAAAAGGTTCTATGTGGGATCATATCATGCACTGAGGAGAAGATCTGCTAACATGGATGTGCTGGTTGCGTTAGGCACTAATGCTGCTTATTTTTACTCATTATATATTGTAATAAAAGCACTGACTTCAGATACATTTCAAGGACAAGACTTCTTTGAAACCAGTTCCATGTTGATATCCTTTATTCTATTAGGAAAATATTTGGAGATTGTGGCTAAAGGGAAAACATCAGATGC 584 0.399 MDLLEHIVTVSYDPDFTGPRTLIHCVQEASRGSKVYRATLYSPSGRREKDKVNEIRMYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYKVHNMLTLGLFLRWILCTPVQFIVGKRFYVGSYHALRRRSANMDVLVALGTNAAYFYSLYIVIKALTSDTFQGQDFFETSSMLISFILLGKYLEIVAKGKTSDA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89644g00001 195 PRINTS Copper-transporting ATPase 1 signature 117 142 - -
Trme89644g00001 195 PRINTS Copper-transporting ATPase 1 signature 62 83 - -
Trme89644g00001 195 PRINTS Copper-transporting ATPase 1 signature 97 117 - -
Trme89644g00001 195 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 2 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89644g00001 Trme-Chr89644 1 709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89644g00001 8 195 Primary Pumps ATPases AT1G63440 57.895 1.85e-65 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89644g00001 K17686 - gmx:100793894 355.525