Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89620g00001 AAAACTCGAAACAGAGGAACAGTAAATGAAGGCCGGTCGTCTAGGAGAAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCGAAGGTAGAGAGCGGTAGGTATTCATCTTCAAACTTGAAGGTCAATGAAGATGAAATGTCATTTATTGAGCAGAAGTTCATGGATGCCAAACGCCTTGCGACTTATCAGGATTTTCAGTCTTCAAAGGATTTCCATGATACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAGTACTTGAAGCGGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTGCAAGATACCCCTTTCCAATCACATTCCAGTCATGTAGAATCAACTAATATGGAGAACTTTGAACATGATTTCAATTGGAGATCAGATAGGGAGACAACACAGGTGAATTACAATAGAATGGTACCAGAATTGAATCATCACCTTGTTCTCCGCGTAGTTTTATGTCAGAACATGGAAATCATGCTGAATTTCCAGATGTCAGATTTAGAGATACTGAAATGTATCAAAAAATAA 564 0.3848 KTRNRGTVNEGRSSRRSSRDQEEFKDVFEVSEIPKVESGRYSSSNLKVNEDEMSFIEQKFMDAKRLATYQDFQSSKDFHDTLEVLDSNKDLLLKYLKRPDSLFKKHLNDLQDTPFQSHSSHVESTNMENFEHDFNWRSDRETTQVNYNRMVPELNHHLVLRVVLCQNMEIMLNFQMSDLEILKCIKK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89620g00001 187 Pfam Protein of unknown function (DUF3741) 57 101 IPR022212 -
Trme89620g00001 187 PANTHER AFADIN 6 157 - -
Trme89620g00001 187 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89620g00001 Trme-Chr89620 1 727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89620g00001 6 129 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 46.875 1.05e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89620g00001 - - vum:124823519 212.616