Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89596g00001 GCCAAGGCTACTATTCTTTTGATGCCTAAATTCGACATAAATGCTTTCTTGAGTCTTGTCAACAAACATGGAGTTACAGTTGCACCGGTAGTACCTCCGATTGTGTTGGCGATTGCAAAGTCCCCGGATCTTAACAAATATGATCTGTCTTCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANGGCAAAGAACTTGAAGACACTGTTAGGACCAAATTTCCCAAAGCAATACTTGGACAGGTATAG 249 0.3614 AKATILLMPKFDINAFLSLVNKHGVTVAPVVPPIVLAIAKSPDLNKYDLSSXXXXXXXXXXXGKELEDTVRTKFPKAILGQV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89596g00001 82 Gene3D - 1 82 - -
Trme89596g00001 82 SUPERFAMILY Acetyl-CoA synthetase-like 2 78 - -
Trme89596g00001 82 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89596g00001 Trme-Chr89596 109 357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89596g00001 3 81 Monolignol Biosynthesis Gene Families AT1G51680 59.494 1.82e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89596g00001 K01904 - gmx:547944 105.145