Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme894451g00001 ATGGTTGATTACGCTATGGATATTCACAAGACACTTTACCATACTGAAGATGTTCCTCAGGATATGGTTGAACGTAGGGCTGATGTTGTTGCTCGTCTCAAGTCTCTTGAAGATGCTGCTGCTCCTCTTGTTGCTTTTCTTCAGAATCCTGCT 153 0.4314 MVDYAMDIHKTLYHTEDVPQDMVERRADVVARLKSLEDAAAPLVAFLQNPA 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme894451g00001 51 Pfam eIF3 subunit 6 N terminal domain 1 50 IPR019010 -
Trme894451g00001 51 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 50 IPR016650 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme894451g00001 Trme-Chr894451 1 153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme894451g00001 1 50 Eukaryotic Initiation Factors Gene Family AT3G57290 84.000 4.95e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme894451g00001 K03250 - twl:120013677 96.2857