Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89417g00001 ATGCACTTGTTGGGAACAACTACTACTTGGTTCTTGTTGGATATTGCTTTCTATAGTCAGAATCTTTTCCAAAAGGACATTTTCACCGCCATTGGATGGATCCCTCCGGCGAAAGAAATGAACGCAATCCACGAACTTTATAGGATTGCAAGAGCACAAACACTTATAGCAATGTGCAGTACTGTGCCAGGTTACTGGTTTACAGTGGCATTCATCGATTACATGGGTCGATTCGCAATCCAATTGATGGGTTTCTTCTTCATGACCGTCTTCATGTTCGCTCTCGCTATACCTTACGATCACTGGACTAAAAAAGAAAACAGAATCGGATTTGTTGTGATGTACTCATTAACTTTCTTTTTCGCCAATTTTGGTCCAAATGCTACCACATTTGTTGTTCCAGCCGAAATTTTCCCTGCAAGGCTGAGATCCACCTGTCATGGAATTTCGGCTGCTGCAGGAAAAGCGGGAGCAATTGTTGGTGCATTTGGATTCTTATATGCTGCACAAAGTAAGGATCCAACTAAGACTGATGCAGGTTACCCAACCGGTATTGGTATTAAGAACTCGCTTATTATGCTCGGTGTTGTCAACTTCTTTGGAATG 606 0.4224 MHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAIHELYRIARAQTLIAMCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDAGYPTGIGIKNSLIMLGVVNFFGM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89417g00001 202 Gene3D MFS general substrate transporter like domains 1 202 IPR036259 -
Trme89417g00001 202 Pfam Sugar (and other) transporter 53 200 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trme89417g00001 202 SUPERFAMILY MFS general substrate transporter 3 199 IPR036259 -
Trme89417g00001 202 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 202 IPR020846 GO:0022857
Trme89417g00001 202 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89417g00001 Trme-Chr89417 49 654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89417g00001 1 202 Inorganic Solute Cotransporters AT3G54700 85.644 1.34e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89417g00001 K08176 - gmx:100780201 392.119