Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8940g00001 ATGGTCAAAGACGCAATGGACCTTATTGAAGATGAACGTCTGGAACTCATGGAATTAGCTGCATCAAAGAAGGGGCTATCTTCAATACTGGCTCTTGACTACGAAACTATGCAAAATCTTGAATCATATGGAGAGTATAAATCACATGCTTATAATGCTAGCAGCTCAGCTGAGTCAGCTAGATCAGACAGCTGA 195 0.4103 MVKDAMDLIEDERLELMELAASKKGLSSILALDYETMQNLESYGEYKSHAYNASSSAESARSDS 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8940g00001 64 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 2 43 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8940g00001 Trme-Chr8940 1264 1692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8940g00001 1 43 Homeobox Transcription Factor Family AT5G44180 67.442 1.56e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8940g00001 - - lja:Lj0g3v0211739.1 73.559