Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89377g00001 ATGCAATGCATTGACTGGTACTTGCTAGTTGCTAGAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCATTCGGTCGGCAACTGTGTGAAGCGTGTTGTGGTCATTGTGAGCTCTGTCATCATCTTCAAAACAGCCGTCTCTCCCTTGAATGCTGCTGGTACCGCTATAGCTCTTGCTGGTGTTTTCCTCTATTCAAGG 207 0.4638 MQCIDWYLLVARVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTAVSPLNAAGTAIALAGVFLYSR 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89377g00001 69 PANTHER SOLUTE CARRIER FAMILY 35 9 68 - -
Trme89377g00001 69 Pfam Triose-phosphate Transporter family 6 68 IPR004853 -
Trme89377g00001 69 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89377g00001 Trme-Chr89377 124 626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89377g00001 3 69 Antiporters AT3G01550 71.642 7.79e-26 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89377g00001 K15283 - pvy:116136162 93.2041