Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8932g00001 TCTGCTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGACCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAAGAGGTTTCGGCTCTTTTCTACATTGGGACAACTAGATCTCATCCACCCATACCGGAACATCTGTCTACTGAGGCAAAGGACTTTTTGCTGAAATGCTTTCACAAGGAACCAGATCTAAGACCTTCTGCATCAGACTTGTTACTGCATCCTTTCATCACCTGCGAGTATCAGGACTCTCATTCAATATCATGCAGTTCAATCAGGGACTCTTGCAATCAGATGGCAACAAATGGGATGAACTCTAGAAACTTTCTGGATTCTATCCAAGGATCAACATGCACAGGCCTAAAGGATGTTCGTCAGATGGATAGTTTAAGGTTCTCAACTGTATATCATGCAAATCCTCTAAATGCAGGTTCCTACCAAGGAACAAACAATTATGATGATGACATGTGTCAGATAGATGATAAAGATGATTTCTTGGTTGCTTCATCAGTAAATTCAAAATCCTTACTTGCTGCTGACGACATAAAGAGTTTCAATCCGATGTGTGAACCTGTGGAGGATGACTGGCCTTGCAAGTTTGACGAAACACCAAATTTGAAGAAAAGCAGACTGAACTTGTCCCCAGATCAAACTATTAGGAAAACTATGAGTCCAGAGCCATCTCCTAATGCAGATAATGAGTTCTCGTTTTCAAGTGAACCTCTTGGAGTTGAAGATGATGATGAAGTGACAGAGTTCAAAATTAGAGCTTTCCTGGATGATAAGGTTCTATTTTAG 804 0.4117 SADIWSVACTVIEMTTGKPPWSQQYPQEVSALFYIGTTRSHPPIPEHLSTEAKDFLLKCFHKEPDLRPSASDLLLHPFITCEYQDSHSISCSSIRDSCNQMATNGMNSRNFLDSIQGSTCTGLKDVRQMDSLRFSTVYHANPLNAGSYQGTNNYDDDMCQIDDKDDFLVASSVNSKSLLAADDIKSFNPMCEPVEDDWPCKFDETPNLKKSRLNLSPDQTIRKTMSPEPSPNADNEFSFSSEPLGVEDDDEVTEFKIRAFLDDKVLF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8932g00001 267 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Trme8932g00001 267 Pfam Protein kinase domain 2 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8932g00001 267 Gene3D Transferase(Phosphotransferase) domain 1 1 127 - -
Trme8932g00001 267 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 128 - -
Trme8932g00001 267 MobiDBLite consensus disorder prediction 209 239 - -
Trme8932g00001 267 ProSiteProfiles Protein kinase domain profile. 1 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8932g00001 267 MobiDBLite consensus disorder prediction 209 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8932g00001 Trme-Chr8932 275 1773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8932g00001 1 265 MAP Kinase Kinase Kinase AT3G06030 47.388 7.70e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trme8932g00001 Pkinase 1.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8932g00001 K20606 - psat:127105260 451.44