Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89238g00001 ATGAACTATACTGAGCAACAACTAACAGCAGCTGTTGTTTCTGATGGATTACGACCGGTCCTTGCTAGCAAGGAGTTGGGTATACCATCAAGATTAATATCGATGATACAGAAATGTTGGGATGCTAATCCTAAAAGCAGACCTTCCTTTGATGATATTGTCAAGGAACTTGATTTTATTATGGAACAAAGGAAAGTAATGAAGGTGGAAGATATGCATATTAGAGCATGTAACTTGCCTGTCGACCAAGTTGTGGACAAGACTTATCAAGAGAGTATTAGCTGGTCTACTCAAGGGGAACTTTTGGCCAGGAGTACCTCTAGTTCAACTGATTCTGGTTCCAGAACATGGTGTGAGTCTTATGATGAGTTTTCAGCATACCGTCCAACACTGTCTTGGGGATCTTATGCTACTTGTGGGAGAAGGGAGACTATGGAGGACACACATTTTATTCTACCCCATGTTTGCAACGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGTCACAGAGGTCAGCATTTAGTTGTAATTTAA 537 0.406 MNYTEQQLTAAVVSDGLRPVLASKELGIPSRLISMIQKCWDANPKSRPSFDDIVKELDFIMEQRKVMKVEDMHIRACNLPVDQVVDKTYQESISWSTQGELLARSTSSSTDSGSRTWCESYDEFSAYRPTLSWGSYATCGRRETMEDTHFILPHVCNEKDVYAFGIFDGHRGQHLVVI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89238g00001 178 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 62 - -
Trme89238g00001 178 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
Trme89238g00001 178 SUPERFAMILY PP2C-like 123 174 IPR036457 -
Trme89238g00001 178 SUPERFAMILY Protein kinase-like (PK-like) 15 77 IPR011009 -
Trme89238g00001 178 Gene3D - 115 177 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89238g00001 Trme-Chr89238 48 679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89238g00001 1 172 PP2C-type Phosphatase Gene Family AT2G40860 47.753 1.96e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Trme89238g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89238g00001 - - gmx:100785390 259.996