Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89237g00001 ACAGAAAATGGAAGATGGCGTGATCCTCGACTGTCTTCCCTTTTCATTGAAGAAACAGAAACTGTAGGAATTGAAGGCCCAAAAGAAGAATTGTATGGTTGGTTATTAGATGGTTCAACTGAGCGCACAGCAATATCAGTGGTAGGAATGGGGGGTCTAGGTAAAACAACTCTTGCCAAGCTAGTTTTTGACAGCCAAAAGGTATCAGCACACTTTGATTGTCGTGCTTGCGTCGCAGTTTCTCAATCATACACTGTGAGAGGTTTGTTGATAAACATGATGGAGCAATTTTGTCGGGGAACTGAAGACCCTCTTCCACAGATGTTACACAAAATGGATGACAAGTCGCTGATTATAGAAGTGAGGCAATACTTGCAAAATAAGAGGTTTTTGATACTATTTGATGATGTATGGCAAGAAGATTTTTCCGATCAAATTGAATTTTCCATGCCTAACAACAATAAAGGTAGCAGGATCATAATCACCACTAGAATGATGCATGTTGCAGAGTTTTTCAAGAAATCCTTTCTAGTCCATGTTCACAAACTGCAACTTTTGCCTCCAAATAAAGCATGGGAGCTCTTCTGCAAGAAAGTATTTAGATTTGAACTTGGTGGGCATTGTCCATCGGACCTTGAGGCTGAGTCAAAAGAAATTGTTCAAAAATGCAAGCAGCTACCTCTGGCAATTGTAGCCATTGGTGGTCTACTTTCAACAAAATCTAAAACAAT 731 0.3981 TENGRWRDPRLSSLFIEETETVGIEGPKEELYGWLLDGSTERTAISVVGMGGLGKTTLAKLVFDSQKVSAHFDCRACVAVSQSYTVRGLLINMMEQFCRGTEDPLPQMLHKMDDKSLIIEVRQYLQNKRFLILFDDVWQEDFSDQIEFSMPNNNKGSRIIITTRMMHVAEFFKKSFLVHVHKLQLLPPNKAWELFCKKVFRFELGGHCPSDLEAESKEIVQKCKQLPLAIVAIGGLLSTKSKT 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89237g00001 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 241 IPR027417 -
Trme89237g00001 243 PANTHER DISEASE RESISTANCE PROTEIN RP 21 241 IPR044974 GO:0006952
Trme89237g00001 243 PRINTS Disease resistance protein signature 223 237 - -
Trme89237g00001 243 PRINTS Disease resistance protein signature 44 59 - -
Trme89237g00001 243 PRINTS Disease resistance protein signature 124 138 - -
Trme89237g00001 243 Pfam NB-ARC domain 25 242 IPR002182 GO:0043531
Trme89237g00001 243 Gene3D - 186 243 IPR042197 -
Trme89237g00001 243 FunFam Probable disease resistance protein At1g61300 7 175 - -
Trme89237g00001 243 Gene3D - 10 178 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89237g00001 Trme-Chr89237 3 733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89237g00001 17 185 WRKY Transcription Factor Family AT4G12020 27.326 3.07e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89237g00001 K13457 - tpra:123915389 443.351