Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme89122g00001 GAGCTTGGTGGGGTTGGCAGAGTTTGTGATGTTCTTCAAGCTCAAAGTCAACACTCATTAGAGAAGATCATTGGGAACTTTGGAACAAGCTTCTCTAGCATTCTATGGAATAGCTGCAAGGACAATCTTTACACCATTTCACTGATGCTGATTTCGGCCTCACTGTCCTTTGCCACAGAGCTCAAGCAGGAGGGACTCAGATATGGCTGGCATGATGGTGTTGCTATGGTTTTTGTTGTTCTGCTTCTGCTTGTGTTCTCTTCAATAACAAAGTTTTGGCGCGAACGAAAAACGCTGAAATTAGCAAAGAAAAAAGGAGAAGCGGCGAAATTCATTGTTAAAAGATGTGAAGAGTTCCAGTTGGTTGATCTTGATCTTTCCAAATATGATATTGTGGTGGGTGACATGGTGTGTTTGACTCCCCATGATGAGGTTCCTGCTGACGGTTTGCTTCTGAGTGGCAACGTCCTTGTGCTGGTTGAGGGAATGAAAAATGAAAAAATTAATTGTGTAGAAAACCCATTTCTTATAGCTGGTCCAAAGGTGATTGAGGGTCATGGATGGATGGTTGTGACATCA 579 0.4283 ELGGVGRVCDVLQAQSQHSLEKIIGNFGTSFSSILWNSCKDNLYTISLMLISASLSFATELKQEGLRYGWHDGVAMVFVVLLLLVFSSITKFWRERKTLKLAKKKGEAAKFIVKRCEEFQLVDLDLSKYDIVVGDMVCLTPHDEVPADGLLLSGNVLVLVEGMKNEKINCVENPFLIAGPKVIEGHGWMVVTS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme89122g00001 193 PANTHER CATION TRANSPORTING ATPASE 29 193 - -
Trme89122g00001 193 Gene3D - 15 193 - -
Trme89122g00001 193 SUPERFAMILY Calcium ATPase, transduction domain A 127 192 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme89122g00001 Trme-Chr89122 1 734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme89122g00001 10 192 Primary Pumps ATPases AT4G29900 31.915 3.24e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme89122g00001 K01537 - gmx:102661547 139.043