Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8910g00001 CTTCTTGGAAATTTGAAGATCATCAATTTGAGAAATTCCAAATATCTACATCAAACTCCAGACTTCACTGGAATTCCAAATCTTGAAAAATTGGATCTTGAAGGCTGCATAAACCTAGTTGAGGTTCATGCTTCTCTTGGACTTCTTAAAAAGCTTTCATATGTGACATTAGAAGATTGCAAAAGTCTTAAAAGCCTTCCGGGAAAATTGGAAATGAATTCTTTGAAGCGTCTCATTCTATCAGGCTGCACAGCAGTTAGAAAGCTTCCTGATTTCGGGGAAAGTATGACAAATCTATCCACACTTGCTTTGGATGAGATTCCCATAGCTGAACTACCTCCAACTATTGGTTACTTGACAGGTCTTAATAGCTTGCGTTTACGGGAATGTAGAAATATTGTTTCCCTTCCAAATACATTTTCTAATTTGAAATCTCTCAAAAGGCTCAATTTATCTGGTTGCTCAAAATTTTACAAGCTTCCTGATAATTTGCATGAAAATGAGGCTTTGGAGTGTCTTAATGTGAGTGACACTGCTATAAGAGAAGTTCCTTCATCCATTGTTCATTTGAAAAATCTTGTATTACTTTCATTTCATGGATGCAAAGGACTATCATGGAACTCAGAGAGCTCACGCTTCCCTTTGGGTAAGCTTTTCAGGTTTGGTACTGATCCAATTCCCAAGAAATTAATCTTGCCTTCTTTTTCTGGTCTATCCTCATTGAAGAAACTAGACTTAAGCTATTGCAATCTCTATGATGGATCAATTCCTGATGATCTTGGCTGTTTATCATCATTGGTAACATTAGATATAAGTGGGAACAATTTTGTGAACCTTCATGATGGCTGCATATCTAAACTTTTGAAGCTAGAAAGACTTGTGTTGAGTAGTTGCCAAAACCTGCAGTCATTGCCTAAGCTACCGCCAAATGTACATGTTGTTAATGCAAGTGATTGTGGTTCAATGAAACCCTTATCAAATCCACAAGAGATATGGAGTCACTTGTCATCGTTTGCTTTTGATAAGTTGCAAGATGCAAATCCGATCAAAACTTTATTGCTCAACTTCGTCAACGGTATGATAGAAGTGAATGGTGGGGAATTTTGGTTTGCCTTGTCATAG 1122 0.3717 LLGNLKIINLRNSKYLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGLLKKLSYVTLEDCKSLKSLPGKLEMNSLKRLILSGCTAVRKLPDFGESMTNLSTLALDEIPIAELPPTIGYLTGLNSLRLRECRNIVSLPNTFSNLKSLKRLNLSGCSKFYKLPDNLHENEALECLNVSDTAIREVPSSIVHLKNLVLLSFHGCKGLSWNSESSRFPLGKLFRFGTDPIPKKLILPSFSGLSSLKKLDLSYCNLYDGSIPDDLGCLSSLVTLDISGNNFVNLHDGCISKLLKLERLVLSSCQNLQSLPKLPPNVHVVNASDCGSMKPLSNPQEIWSHLSSFAFDKLQDANPIKTLLLNFVNGMIEVNGGEFWFALS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8910g00001 373 Gene3D Ribonuclease Inhibitor 96 208 IPR032675 -
Trme8910g00001 373 Gene3D Ribonuclease Inhibitor 1 95 IPR032675 -
Trme8910g00001 373 SUPERFAMILY L domain-like 3 305 - -
Trme8910g00001 373 Gene3D Ribonuclease Inhibitor 225 362 IPR032675 -
Trme8910g00001 373 Pfam Leucine Rich Repeat 265 287 IPR001611 GO:0005515
Trme8910g00001 373 Pfam Leucine Rich Repeat 240 260 IPR001611 GO:0005515
Trme8910g00001 373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 72 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8910g00001 Trme-Chr8910 174 1499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8910g00001 2 198 WRKY Transcription Factor Family AT4G12020 37.563 2.10e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8910g00001 - - tpra:123888765 669.463