Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8901g00001 CCACCACTTTTCCCGAAACCTACAAATGTAGCATTTGCTGCTCCTATTCATTTGTTAAACAATGCTCAACTTGGTAACCCTGGTAGAAGTGTAGTGCCTGGTGTTGGAATGTTTGGTTTATCTGCGGCGAATGTTGTAGCTCCTGTTGATTCTCCTGGAAGTAAAATGTCGCCGGATGCAATTACAAAGCATAATGTAGATCCTTCTTTACCATCACCAGTTCCTTATGGAATCAACAGAGGGAGGAAGTGTGGTGCTGTAGAAAAAGTTGTTGAAAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCGAGGTCACGGGCTCGCAAACAGGCCTACACTGTTGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAACGTGGAATTACAAAGAAAACAGGCAGAATTTCAGGAAATGCAGAAAAATAAGGAGGACCTGTTACGGACAAATAAAATTAAATTCTTGAGAAGGACACTTACAGGTCCATGGTAG 504 0.4147 PPLFPKPTNVAFAAPIHLLNNAQLGNPGRSVVPGVGMFGLSAANVVAPVDSPGSKMSPDAITKHNVDPSLPSPVPYGINRGRKCGAVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNVELQRKQAEFQEMQKNKEDLLRTNKIKFLRRTLTGPW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8901g00001 167 SMART brlzneu 89 153 IPR004827 GO:0003700|GO:0006355
Trme8901g00001 167 Pfam bZIP transcription factor 93 148 IPR004827 GO:0003700|GO:0006355
Trme8901g00001 167 Gene3D - 91 149 - -
Trme8901g00001 167 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 91 148 - -
Trme8901g00001 167 Coils Coil 116 153 - -
Trme8901g00001 167 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 91 142 IPR004827 GO:0003700|GO:0006355
Trme8901g00001 167 SUPERFAMILY Leucine zipper domain 93 144 IPR046347 GO:0003700|GO:0006355
Trme8901g00001 167 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 51 167 IPR043452 GO:0003700|GO:0045893
Trme8901g00001 167 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 96 111 IPR004827 GO:0003700|GO:0006355
Trme8901g00001 167 CDD bZIP_plant_BZIP46 93 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8901g00001 Trme-Chr8901 1 998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8901g00001 4 167 bZIP Transcription Factor Family AT4G34000 51.337 7.70e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme8901g00001 bZIP_1 3.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8901g00001 K14432 - gmx:100776600 198.749